5 papers
Megahertz X-ray microscopy at X-ray Free-Electron Laser and Synchrotron sources
Patrik Vagovič, Tokushi Sato, Ladislav Mikeš +17
We demonstrate X-ray phase contrast microscopy performed at the European X-ray Free-Electron Laser sampled at 1.128 MHz rate. We have applied this method to image stochastic proces…
Self-organized manifold learning and heuristic charting via adaptive metrics
Denis Horvath, Jozef Ulicny, Branislav Brutovsky
Classical metric and non-metric multidimensional scaling (MDS) variants are widely known manifold learning (ML) methods which enable construction of low dimensional representation…
Bcl-2 family controls mitochondrial outer membrane permeabilization by performing non-trivial pattern recognition
Tomas Tokar, Jozef Ulicny
Interactions between individual members of the B-cell lymphoma 2 (Bcl-2) family of proteins form a regulatory network governing mitochondrial outer membrane permeabilization (MOMP)…
Integration of TNF induced apoptosis model and quantitative proteomics data of HeLa cells - our first experience
Csilla Ulicna, Jozef Ulicny
The TNF initiated processes are simulated using our integrative computational model with new quantitative proteomics data obtained on HeLa cell line. In spite of fact, that the mod…
Boolean network-based model of the Bcl-2 family mediated MOMP regulation
Tomas Tokar, Zdenko Turcan, Jozef Ulicny
Mitochondrial outer membrane permeabilization (MOMP) is one of the most important points, in majority of apoptotic signaling cascades. Decision mechanism controlling whether the MO…