3 papers
q-bio.BM2026
Bi-TEAM: A Unified Cross-Scale Representation Learning Framework for Chemically Modified Biomolecules
Chunbin Gu, Zijun Gao, Mutian He +8
Representation learning for protein biochemical space faces a difficult trade-off: protein language models excel at capturing long-range biological semantics but often miss fine-gr…
physics.chem-ph2026
Designing the Haystack: Programmable Chemical Space for Generative Molecular Discovery
Yuchen Zhu, Donghai Zhao, Yangyang Zhang +10
Chemical space exploration underlies drug discovery, yet most generative models treat chemical space as a fixed, implicitly learned distribution, focusing on sampling molecules rat…
q-bio.BM2025
Graph Neural Networks in Modern AI-aided Drug Discovery
Odin Zhang, Haitao Lin, Xujun Zhang +9
Graph neural networks (GNNs), as topology/structure-aware models within deep learning, have emerged as powerful tools for AI-aided drug discovery (AIDD). By directly operating on m…