29 citations · 55 across the 21 of their papers we have counts for
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q-bio.PE2023★ 1 cited
Rare Events Analysis and Computation for Stochastic Evolution of Bacterial Populations
Yingxue Su, Brett Geiger, Ilya Timofeyev +2
In this paper, we develop a computational approach for computing most likely trajectories describing rare events that correspond to the emergence of non-dominant genotypes. This wo…
q-bio.PE2018
Fitness Estimation for Genetic Evolution of Bacterial Populations
Sergey S. Sarkisov, Ilya Timofeyev, Robert Azencott
In this paper we develop and test algorithmic techniques to estimate genotypes fitnesses by analysis of observed daily frequency data monitoring the long-term evolution of bacteria…