2 papers
cs.LG2026
Task- and dataset-specific information in protein language models
Roman Joeres, Ilya Senatorov, Olga V. Kalinina +2
Protein language models (PLMs) have transferred the latest advances from natural language processing to computational biology. These models, trained on large corpora of protein seq…
cs.LG2025
Higher-Order Message Passing for Glycan Representation Learning
Roman Joeres, Daniel Bojar
Glycans are the most complex biological sequence, with monosaccharides forming extended, non-linear sequences. As post-translational modifications, they modulate protein structure,…