3 papers
cs.LG2026★ 1 cited
FragFM: Hierarchical Framework for Efficient Molecule Generation via Fragment-Level Discrete Flow Matching
Joongwon Lee, Seonghwan Kim, Seokhyun Moon +2
We introduce FragFM, a novel hierarchical framework via fragment-level discrete flow matching for efficient molecular graph generation. FragFM generates molecules at the fragment l…
q-bio.BM2025
DeepBioisostere: Discovering Bioisosteres with Deep Learning for a Fine Control of Multiple Molecular Properties
Hyeongwoo Kim, Seokhyun Moon, Wonho Zhung +3
Optimizing molecular properties while preserving biological activity is a central challenge in drug design. Bioisosteric replacement, which substitutes a molecular fragment with a…
cs.LG2025
Discrete Diffusion Schrödinger Bridge Matching for Graph Transformation
Jun Hyeong Kim, Seonghwan Kim, Seokhyun Moon +3
Transporting between arbitrary distributions is a fundamental goal in generative modeling. Recently proposed diffusion bridge models provide a potential solution, but they rely on…