145 citations · 240 across the 14 of their papers we have counts for
Showing q-bio.GNShow all
2 papers · 1 filter
q-bio.GN2013★ 1 cited
Adaptive reference-free compression of sequence quality scores
Lilian Janin, Giovanna Rosone, Anthony J. Cox
Motivation: Rapid technological progress in DNA sequencing has stimulated interest in compressing the vast datasets that are now routinely produced. Relatively little attention has…
q-bio.GN2013★ 12 cited
Comparing DNA sequence collections by direct comparison of compressed text indexes
Anthony J. Cox, Tobias Jakobi, Giovanna Rosone +1
Popular sequence alignment tools such as BWA convert a reference genome to an indexing data structure based on the Burrows-Wheeler Transform (BWT), from which matches to individual…