30 citations · 76 across the 8 of their papers we have counts for
Showing q-bio.QMShow all
2 papers · 1 filter
q-bio.QM2016
Safe and complete contig assembly via omnitigs
Alexandru I. Tomescu, Paul Medvedev
Contig assembly is the first stage that most assemblers solve when reconstructing a genome from a set of reads. Its output consists of contigs -- a set of strings that are promised…
q-bio.QM2014★ 15 cited
On the representation of de Bruijn graphs
Rayan Chikhi, Antoine Limasset, Shaun Jackman +2
The de Bruijn graph plays an important role in bioinformatics, especially in the context of de novo assembly. However, the representation of the de Bruijn graph in memory is a comp…