3 papers
cs.LG2026
Denoising Diffusion Variational Inference: Diffusion Models as Expressive Variational Posteriors
Wasu Top Piriyakulkij, Yingheng Wang, Volodymyr Kuleshov
We propose denoising diffusion variational inference (DDVI), a black-box variational inference algorithm for latent variable models which relies on diffusion models as flexible app…
cs.LG2025
Graffe: Graph Representation Learning via Diffusion Probabilistic Models
Dingshuo Chen, Shuchen Xue, Liuji Chen +5
Diffusion probabilistic models (DPMs), widely recognized for their potential to generate high-quality samples, tend to go unnoticed in representation learning. While recent progres…
q-bio.BM2025
Long-context Protein Language Modeling Using Bidirectional Mamba with Shared Projection Layers
Yingheng Wang, Zichen Wang, Gil Sadeh +4
Self-supervised training of language models (LMs) has seen great success for protein sequences in learning meaningful representations and for generative drug design. Most protein L…