activity
20002005
most citedCodon Distributions in DNA

25 citations · 56 across the 11 of their papers we have counts for

collaborators

11 papers

q-bio.GN2005★ 9 cited

tRNA-isoleucine-tryptophan Composite Gene

Zhumur Ghosh, Jayprokas Chakrabarti, Bibekanand Mallick +3

Transfer-RNA genes in archaea often have introns intervening between exon sequences. The structural motif at the boundary between exon and intron is the bulge-helix-bulge. Computat…

q-bio.BM2005

Embedded transfer RNA Genes

Zhumur Ghosh, Smarajit Das, Jayprokas Chakrabarti +2

In euryarchaeal methanogen M.kandleri and in Nanoarchaea N. equitans some of the missing tRNA genes are embedded in others. We argue from bioinformatic evidence that position speci…

q-bio.GN2005

Positioning Crenarchaeal tRNA-Introns

Smarajit Das, Zhumur Ghosh, Jayprokas Chakrabarti +2

We precisely position a noncanonical intron in the odd second copy of tRNAAsp(GTC) gene in the newly sequenced crenarchaea S.acidocaldarius. The uniform assortment of some features…

q-bio.GN2005

Introns Restructure tRNA Genes of Archaea

Zhumur Ghosh, Smarajit Das, Jayprokas Chakrabarti +2

This paper has been withdrawn by the author.

q-bio.GN2005

Weighted-Codon-Usage Based Phylogeny In Ectocarpales

Smarajit Das, Jayprokas Chakrabarti, Zhumur Ghosh +2

We analyse forty seven chloroplastid genes of the large subunit of RuBisCO, from the Algal order Ectocarpales, sourced from GenBank. Codon-usage weighted by the nucleotide base bia…

q-bio.GN2005★ 21 cited

Identity Elements of Archaeal tRNA

Bibekanand Mallick, Jayprokas Chakrabarti, Satyabrata Sahoo +2

Features unique to a transfer-RNA are recognized by the corresponding tRNA-synthetase. Keeping this in view we isolate the discriminating features of all archaeal tRNA. These are o…