526 citations · 8k across the 188 of their papers we have counts for
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Sequence dependence of DNA translocation through a nanopore
Kaifu Luo, Tapio Ala-Nissila, See-Chen Ying +1
We investigate the dynamics of DNA translocation through a nanopore using 2D Langevin dynamics simulations, focusing on the dependence of the translocation dynamics on the details…
Comment on ``Passage Times for Unbiased Polymer Translocation through a Narrow Pore''
Kaifu Luo, Tapio Ala-Nissila, See-Chen Ying +2
One of the most fundamental quantities associated with polymer translocation through a nanopore is the translocation time and its dependence on the chain length . Our simula…
Influence of polymer-pore interactions on translocation
Kaifu Luo, Tapio Ala-Nissila, See-chen Ying +1
We investigate the influence of polymer-pore interactions on the translocation dynamics using Langevin dynamics simulations. An attractive interaction can greatly improve transloca…
Microscopic mechanism for cold denaturation
Cristiano L. Dias, Tapio Ala-Nissila, Mikko Karttunen +2
We elucidate the mechanism of cold denaturation through constant-pressure simulations for a model of hydrophobic molecules in an explicit solvent. We find that the temperature depe…
Heteropolymer translocation through nanopores
Kaifu Luo, Tapio Ala-Nissila, See-Chen Ying +1
We investigate the translocation dynamics of heteropolymers driven through a nanopore using a constant temperature Langevin thermostat. Specifically, we consider heteropolymers con…