3 papers
q-bio.QM2026
HistoAtlas: A Pan-Cancer Morphology Atlas Linking Histomics to Molecular Programs and Clinical Outcomes
Pierre-Antoine Bannier
We present HistoAtlas, a pan-cancer computational atlas that extracts 38 interpretable histomic features from 6,745 diagnostic H&E slides across 21 TCGA cancer types and systematic…
cs.CV2025
IMILIA: interpretable multiple instance learning for inflammation prediction in IBD from H&E whole slide images
Thalyssa Baiocco-Rodrigues, Antoine Olivier, Reda Belbahri +7
As the therapeutic target for Inflammatory Bowel Disease (IBD) shifts toward histologic remission, the accurate assessment of microscopic inflammation has become increasingly centr…
cs.CV2025
Towards Comprehensive Cellular Characterisation of H&E slides
Benjamin Adjadj, Pierre-Antoine Bannier, Guillaume Horent +13
Cell detection, segmentation and classification are essential for analyzing tumor microenvironments (TME) on hematoxylin and eosin (H&E) slides. Existing methods suffer from poor p…