3 papers
physics.bio-ph2002
On the Kinematics of Protein Folding
Sean Cahill, Michael Cahill, Kevin Cahill
We offer simple solutions to three kinematic problems that occur in the folding of proteins. We show how to construct suitably local elementary Monte Carlo moves, how to close a lo…
cond-mat.soft2001
Proteins Wriggle
Michael Cahill, Sean Cahill, Kevin Cahill
We propose an algorithmic strategy for improving the efficiency of Monte Carlo searches for the low-energy states of proteins. Our strategy is motivated by a model of how proteins…
hep-lat1999
Simulations of Protein Folding
Michael Cahill, Mark Fleharty, Kevin Cahill
We have developed a simple, phenomenological, Monte-Carlo code that predicts the three-dimensional structure of globular proteins from the DNA sequences that define them. We have a…