4 papers · 1 filter
Graph Fourier Neural ODEs: Modeling Spatial-temporal Multi-scales in Molecular Dynamics
Fang Sun, Zijie Huang, Haixin Wang +4
Accurately predicting long-horizon molecular dynamics (MD) trajectories remains a significant challenge, as existing deep learning methods often struggle to retain fidelity over ex…
Physics-Informed Regularization for Domain-Agnostic Dynamical System Modeling
Zijie Huang, Wanjia Zhao, Jingdong Gao +6
Learning complex physical dynamics purely from data is challenging due to the intrinsic properties of systems to be satisfied. Incorporating physics-informed priors, such as in Ham…
Learning Over Molecular Conformer Ensembles: Datasets and Benchmarks
Yanqiao Zhu, Jeehyun Hwang, Keir Adams +10
Molecular Representation Learning (MRL) has proven impactful in numerous biochemical applications such as drug discovery and enzyme design. While Graph Neural Networks (GNNs) are e…
BrainODE: Dynamic Brain Signal Analysis via Graph-Aided Neural Ordinary Differential Equations
Kaiqiao Han, Yi Yang, Zijie Huang +8
Brain network analysis is vital for understanding the neural interactions regarding brain structures and functions, and identifying potential biomarkers for clinical phenotypes. Ho…