39 citations · 39 across the 1 of their papers we have counts for
4 papers
Twist/Writhe Partitioning in a Coarse-Grained DNA Minicircle Model
Mehmet Sayar, Baris Avsaroglu, Alkan Kabakcioglu
Here we present a systematic study of supercoil formation in DNA minicircles under varying linking number by using molecular dynamics simulations of a two-bead coarse-grained model…
Semi-classical buckling of stiff polymers
Marc Emanuel, Hervé Mohrbach, Mehmet Sayar +2
A quantitative theory of the buckling of a worm like chain based on a semi-classical approximation of the partition function is presented. The contribution of thermal fluctuations…
Finite Size Polyelectrolyte Bundles at Thermodynamic Equilibrium
Mehmet Sayar, Christian Holm
We present the results of extensive computer simulations performed on solutions of monodisperse charged rod-like polyelectrolytes in the presence of trivalent counterions. To overc…
Polyelectrolyte Bundles
H. J. Limbach, M. Sayar, C. Holm
Using extensive Molecular Dynamics simulations we study the behavior of polyelectrolytes with hydrophobic side chains, which are known to form cylindrical micelles in aqueous solut…