20 citations · 29 across the 3 of their papers we have counts for
3 papers
q-bio.GN2013
Exploration and retrieval of whole-metagenome sequencing samples
Sohan Seth, Niko Välimäki, Samuel Kaski +1
Over the recent years, the field of whole metagenome shotgun sequencing has witnessed significant growth due to the high-throughput sequencing technologies that allow sequencing ge…
cs.DS2010★ 20 cited
Indexing Finite Language Representation of Population Genotypes
Jouni Sirén, Niko Välimäki, Veli Mäkinen
With the recent advances in DNA sequencing, it is now possible to have complete genomes of individuals sequenced and assembled. This rich and focused genotype information can be us…
cs.DB2009★ 9 cited
Fast In-Memory XPath Search over Compressed Text and Tree Indexes
A. Arroyuelo, F. Claude, S. Maneth +5
A large fraction of an XML document typically consists of text data. The XPath query language allows text search via the equal, contains, and starts-with predicates. Such predicate…