3 papers
cs.SE2013
Composable Languages for Bioinformatics: The NYoSh experiment
Manuele Simi, Fabien Campagne
Language workbenches are software engineering tools that help domain experts develop solutions to various classes of problems. Some of these tools focus on non-technical users and…
q-bio.QM2012
GobyWeb: simplified management and analysis of gene expression and DNA methylation sequencing data
Kevin C. Dorff, Nyasha Chambwe, Zachary Zeno +2
We present GobyWeb, a web-based system to facilitate the management and analysis of high-throughput sequencing (HTS) projects. The software provides integrated support for a broad…
q-bio.QM2012
Compression of structured high-throughput sequencing data
Fabien Campagne, Kevin C. Dorff, Nyasha Chambwe +3
Large biological datasets are being produced at a rapid pace and create substantial storage challenges, particularly in the domain of high-throughput sequencing (HTS). Most approac…