3 papers
q-bio.MN2013
Dimension Reduction of Large AND-NOT Network Models
Alan Veliz-Cuba, Reinhard Laubenbacher, Boris Aguilar
Boolean networks have been used successfully in modeling biological networks and provide a good framework for theoretical analysis. However, the analysis of large networks is not t…
math.DS2012
Boolean nested canalizing functions: a comprehensive analysis
Yuan Li, John O. Adeyeye, David Murrugarra +2
Boolean network models of molecular regulatory networks have been used successfully in computational systems biology. The Boolean functions that appear in published models tend to…
q-bio.MN2012
Modeling Stochasticity and Variability in Gene Regulatory Networks
David Murrugarra, Alan Veliz-Cuba, Boris Aguilar +2
Modeling stochasticity in gene regulatory networks is an important and complex problem in molecular systems biology. To elucidate intrinsic noise, several modeling strategies such…