45 citations · 55 across the 3 of their papers we have counts for
3 papers
Robust identification of noncoding RNA from transcriptomes requires phylogenetically-informed sampling
Stinus Lindgreen, Sinan Ugur Umu, Alicia Sook-Wei Lai +9
Noncoding RNAs are integral to a wide range of biological processes, including translation, gene regulation, host-pathogen interactions and environmental sensing. While genomics is…
An Introduction to RNA Databases
Marc P. Hoeppner, Lars E. Barquist, Paul P. Gardner
We present an introduction to RNA databases. The history and technology behind RNA databases is briefly discussed. We examine differing methods of data collection and curation, and…
Studying RNA homology and conservation with Infernal: from single sequences to RNA families
Lars Barquist, Sarah W. Burge, Paul P. Gardner
Emerging high-throughput technologies have led to a deluge of putative non-coding RNA (ncRNA) sequences identified in a wide variety of organisms. Systematic characterization of th…