2 papers
cs.CE2014
An application of topological graph clustering to protein function prediction
R. Sean Bowman, Douglas Heisterkamp, Jesse Johnson +1
We use a semisupervised learning algorithm based on a topological data analysis approach to assign functional categories to yeast proteins using similarity graphs. This new approac…
math.CO2014
Thin Tree Position
R. Sean Bowman, Douglas R. Heisterkamp, Jesse Johnson
We introduce a method for creating a special type of tree, called a tree position, from a weighted graph. Leaves of the tree correspond to vertices of the original graph, and the t…