204 citations · 235 across the 3 of their papers we have counts for
3 papers
Differential gene co-expression networks via Bayesian biclustering models
Chuan Gao, Shiwen Zhao, Ian C. McDowell +2
Identifying latent structure in large data matrices is essential for exploring biological processes. Here, we consider recovering gene co-expression networks from gene expression d…
A latent factor model with a mixture of sparse and dense factors to model gene expression data with confounding effects
Chuan Gao, Christopher D Brown, Barbara E Engelhardt
One important problem in genome science is to determine sets of co-regulated genes based on measurements of gene expression levels across samples, where the quantification of expre…
Integrative modeling of eQTLs and cis-regulatory elements suggest mechanisms underlying cell type specificity of eQTLs
Christopher D Brown, Lara M Mangravite, Barbara E Engelhardt
Genetic variants in cis-regulatory elements or trans-acting regulators commonly influence the quantity and spatiotemporal distribution of gene transcription. Recent interest in exp…