3 citations · 4 across the 7 of their papers we have counts for
7 papers
Stochastic safety radius on Neighbor-Joining method and Balanced Minimal Evolution on small trees
Jing Xi, Jin Xie, Ruriko Yoshida +1
A distance-based method to reconstruct a phylogenetic tree with leaves takes a distance matrix, symmetric matrix with s in the diagonal, as its input and recons…
Distributions of topological tree metrics between a species tree and a gene tree
Jing Xi, Jin Xie, Ruriko Yoshida
In order to conduct a statistical analysis on a given set of phylogenetic gene trees, we often use a distance measure between two trees. In a statistical distance-based method to a…
Sequential Importance Sampling for Two-dimensional Ising Models
Jing Xi, Seth Sullivant
In recent years, sequential importance sampling (SIS) has been well developed for sampling contingency tables with linear constraints. In this paper, we apply SIS procedure to 2-di…
The characteristic imset polytope of Bayesian networks with ordered nodes
Jing Xi, Ruriko Yoshida
In 2010, M. Studený, R. Hemmecke, and S. Linder explored a new algebraic description of graphical models, called characteristic imsets. Compare with standard imsets, characteristic…
Semigroups and sequential importance sampling for multiway tables
Ruriko Yoshida, Jing Xi, Shaoceng Wei +2
When an interval of integers between the lower bound and the upper bound is the support of the marginal distribution , Chen et al, 2005 noticed…
Estimating the number of zero-one multi-way tables via sequential importance sampling
Jing Xi, Ruriko Yoshida, David Haws
In 2005, Chen et al introduced a sequential importance sampling (SIS) procedure to analyze zero-one two-way tables with given fixed marginal sums (row and column sums) via the cond…