9 citations · 13 across the 3 of their papers we have counts for
3 papers
q-bio.QM2015
Orthologs from maxmer sequence context
Kun Gao, Jonathan Miller
Context-dependent identification of orthologs customarily relies on conserved gene order or whole-genome sequence alignment. It is shown here that short-range context--as short as…
q-bio.GN2014★ 9 cited
Human-chimpanzee alignment: Ortholog Exponentials and Paralog Power Laws
Kun Gao, Jonathan Miller
Genomic subsequences conserved between closely related species such as human and chimpanzee exhibit an exponential length distribution, in contrast to the algebraic length distribu…
math-ph2013★ 4 cited
Fragmentation dynamics of DNA sequence duplications
M. V. Koroteev, J. Miller
Motivated by empirical observations of algebraic duplicated sequence length distributions in a broad range of natural genomes, we analytically formulate and solve a class of simple…