E. de Leonardis

most citedDirect-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction

127 citations · 156 across the 2 of their papers we have counts for

collaborators

2 papers

q-bio.BM2015★ 127 cited

Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction

Eleonora De Leonardis, Benjamin Lutz, Sebastian Ratz +4

Despite the biological importance of non-coding RNA, their structural characterization remains challenging. Making use of the rapidly growing sequence databases, we analyze nucleot…

q-bio.QM2014★ 29 cited

Large Pseudo-Counts and $L_{2}$ -Norm Penalties Are Necessary for the Mean-Field Inference of Ising and Potts Models

J. P. Barton, S. Cocco, E. De Leonardis +1

Mean field (MF) approximation offers a simple, fast way to infer direct interactions between elements in a network of correlated variables, a common, computationally challenging pr…

Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction

Large Pseudo-Counts and L2​-Norm Penalties Are Necessary for the Mean-Field Inference of Ising and Potts Models

Large Pseudo-Counts and $L_{2}$ -Norm Penalties Are Necessary for the Mean-Field Inference of Ising and Potts Models