3 papers
q-bio.GN2015
Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data
Saulo Alves Aflitos, Edouard Severing, Gabino Sanchez-Perez +3
Background: Identification of biological specimens is a major requirement for a range of applications. Reference-free methods analyse unprocessed sequencing data without relying on…
q-bio.GN2015
Introgression Browser: High throughput whole-genome SNP visualization
Saulo Alves Aflitos, Gabino Sanchez-Perez, Dick de Ridder +4
Breeding by introgressive hybridization is a pivotal strategy to broaden the genetic basis of crops. Usually, the desired traits are monitored in consecutive crossing generations b…
q-bio.GN2015
Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing
Saulo A. Aflitos, Elio Schijlen, Richard Finkers +54
Genetic variation in the tomato clade was explored by sequencing a selection of 84 tomato accessions and related wild species representative for the Lycopersicon, Arcanum, Eriopers…