20 citations · 47 across the 3 of their papers we have counts for
3 papers
q-bio.BM2016★ 15 cited
Thermal unfolding of myoglobin in the Landau-Ginzburg-Wilson approach
Xubiao Peng, Adam Sieradzan, Antti J. Niemi
The Landau-Ginzburg-Wilson paradigm is applied to model the low-temperature crystallographic C backbone structure of sperm whale myoglobin. The Glauber protocol is employed to s…
q-bio.BM2015★ 12 cited
Bloch spin waves and emergent structure in protein folding with HIV envelope glycoprotein as an example
Jin Dai, Antti J. Niemi, Jianfeng He +2
We inquire how structure emerges during the process of protein folding. For this we scrutinise col- lective many-atom motions during all-atom molecular dynamics simulations. We int…
cond-mat.soft2014★ 20 cited
Peierls-Nabarro Barrier and Protein Loop Propagation
Adam K. Sieradzan, Antti Niemi, Xubiao Peng
When a self-localized quasiparticle excitation propagates along a discrete one dimensional lattice, it becomes subject to a dissipation that converts the kinetic energy into lattic…