1k citations · 1.2k across the 3 of their papers we have counts for
5 papers
statmod: Probability Calculations for the Inverse Gaussian Distribution
Göknur Giner, Gordon K. Smyth
The inverse Gaussian distribution (IGD) is a well known and often used probability distribution for which fully reliable numerical algorithms have not been available. Our aim in th…
Robust hyperparameter estimation protects against hypervariable genes and improves power to detect differential expression
Belinda Phipson, Stanley Lee, Ian J. Majewski +2
One of the most common analysis tasks in genomic research is to identify genes that are differentially expressed (DE) between experimental conditions. Empirical Bayes (EB) statisti…
Assessing Technical Performance in Differential Gene Expression Experiments with External Spike-in RNA Control Ratio Mixtures
Sarah A. Munro, Steve P. Lund, P. Scott Pine +30
There is a critical need for standard approaches to assess, report, and compare the technical performance of genome-scale differential gene expression experiments. We assess techni…
featureCounts: An efficient general-purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K Smyth, Wei Shi
Next-generation sequencing technologies generate millions of short sequence reads, which are usually aligned to a reference genome. In many applications, the key information requir…
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
Simon Anders, Davis J. McCarthy, Yunshen Chen +4
RNA sequencing (RNA-seq) has been rapidly adopted for the profiling of transcriptomes in many areas of biology, including studies into gene regulation, development and disease. Of…