28 citations · 28 across the 3 of their papers we have counts for
3 papers
q-bio.PE2014
Comparing Nonparametric Bayesian Tree Priors for Clonal Reconstruction of Tumors
Amit G. Deshwar, Shankar Vembu, Quaid Morris
Statistical machine learning methods, especially nonparametric Bayesian methods, have become increasingly popular to infer clonal population structure of tumors. Here we describe t…
q-bio.PE2014
Reconstructing subclonal composition and evolution from whole genome sequencing of tumors
Amit G. Deshwar, Shankar Vembu, Christina K. Yung +3
Tumors often contain multiple subpopulations of cancerous cells defined by distinct somatic mutations. We describe a new method, PhyloWGS, that can be applied to WGS data from one…
cs.LG2012★ 28 cited
Using the Gene Ontology Hierarchy when Predicting Gene Function
Sara Mostafavi, Quaid Morris
The problem of multilabel classification when the labels are related through a hierarchical categorization scheme occurs in many application domains such as computational biology.…