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cond-mat.soft2010
Effect of pressure on the kinetics of bulge bases in small RNAs
Pradeep Kumar, J. Lehmann, A. Libchaber
Using molecular dynamics simulations, we study the effect of pressure on the binding propensity of small RNAs by calculating the free energy barrier corresponding to the looped out…
cond-mat.soft2010★ 1 cited
Dynamics of 2D Monolayer Confined Water in Hydrophobic and Charged Environments
Pradeep Kumar
Using molecular dynamics simulations we study the dynamics of a water-like TIP5P model of water in hydrophilic and hydrophobic confinement. We find that in case of extreme nanocofi…