11 citations · 22 across the 3 of their papers we have counts for
5 papers
Temporal data series of COVID-19 epidemics in the USA, Asia and Europe suggests a selective sweep of SARS-CoV-2 Spike D614G variant
Taima N. Furuyama, Fernando Antoneli, Isabel M. V. G. Carvalho +2
The COVID-19 pandemic started in Wuhan, China, and caused the worldwide spread of the RNA virus SARS-CoV-2, the causative agent of COVID-19. Because of its mutational rate, wide ge…
Stochastic Modeling and Simulation of Viral Evolution
Luiza Guimarães, Diogo Castro, Bruno Gorzoni +2
RNA viruses comprise vast populations of closely related, but highly genetically diverse, entities known as quasispecies. Understanding the mechanisms by which this extreme diversi…
Estimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coverage
Jean P. Zukurov, Sieberth do Nascimento-Brito, Angela C. Volpini +3
In this paper we propose a method and discuss its computational implementation as an integrated tool for the analysis of viral genetic diversity on data generated by high-throughpu…
Virus Replication as a Phenotypic Version of Polynucleotide Evolution
Fernando Antoneli, Francisco Bosco, Diogo Castro +1
In this paper we revisit and adapt to viral evolution an approach based on the theory of branching process advanced by Demetrius, Schuster and Sigmund ("Polynucleotide evolution an…
Viral Evolution and Adaptation as a Multivariate Branching Process
Fernando Antoneli, Francisco Bosco, Diogo Castro +1
In the present work we analyze the problem of adaptation and evolution of RNA virus populations, by defining the basic stochastic model as a multivariate branching process in close…