217 citations · 257 across the 4 of their papers we have counts for
4 papers
Computation Of Microbial Ecosystems in Time and Space (COMETS): An open source collaborative platform for modeling ecosystems metabolism
Ilija Dukovski, Djordje Bajić, Jeremy M Chacón +10
Genome-scale stoichiometric modeling of metabolism has become a standard systems biology tool for modeling cellular physiology and growth. Extensions of this approach are also emer…
The Dynamics of Hybrid Metabolic-Genetic Oscillators
Ed Reznik, Tasso J. Kaper, Daniel Segre
The synthetic construction of intracellular circuits is frequently hindered by a poor knowledge of appropriate kinetics and precise rate parameters. Here, we use generalized modeli…
On the Stability of Metabolic Cycles
Ed Reznik, Daniel Segrè
We investigate the stability properties of two different classes of metabolic cycles using a combination of analytical and computational methods. Using principles from structural k…
Signatures of arithmetic simplicity in metabolic network architecture
W. J. Riehl, P. L. Krapivsky, S. Redner +1
Metabolic networks perform some of the most fundamental functions in living cells, including energy transduction and building block biosynthesis. While these are the best character…