3 citations · 3 across the 1 of their papers we have counts for
3 papers
Stochastic Neural Networks for Automatic Cell Tracking in Microscopy Image Sequences of Bacterial Colonies
Sorena Sarmadi, James J. Winkle, Razan N. Alnahhas +4
Our work targets automated analysis to quantify the growth dynamics of a population of bacilliform bacteria. We propose an innovative approach to frame-sequence tracking of deforma…
Modeling mechanical interactions in growing populations of rod-shaped bacteria
James J. Winkle, Oleg Igoshin, Matthew R. Bennett +2
Advances in synthetic biology allow us to engineer bacterial collectives with pre-specified characteristics. However, the behavior of these collectives is difficult to understand,…
Effects of cell cycle noise on excitable gene circuits
Alan Veliz-Cuba, Chinmaya Gupta, Matthew R. Bennett +2
We assess the impact of cell cycle noise on gene circuit dynamics. For bistable genetic switches and excitable circuits, we find that transitions between metastable states most lik…