11 citations · 22 across the 6 of their papers we have counts for
6 papers
Extraction of kinetics from equilibrium distributions of states using the Metropolis Monte Carlo method
Sergei F. Chekmarev
The Metropolis Monte Carlo (MC) method is used to extract reaction kinetics from a given equilibrium distribution of states of a complex system. The approach is illustrated by the…
First-Passage Time Distributions in Two-State Protein Folding Kinetics: Exploring the Native-Like States vs Overcoming the Free Energy Barrier
Sergei F. Chekmarev
Using a beta-hairpin protein as a representative example of two-state folders, we studied how the exploration of native-like states affects the folding kinetics. It has been found…
Laminar-Turbulent Transition: The change of the flow state temperature with the Reynolds number
Sergei F. Chekmarev
Using the previously developed model to describe laminar/turbulent states of a viscous fluid flow, which treats the flow as a collection of coherent structures of various size (Che…
Protein folding: Complex potential for the driving force in a two-dimensional space of collective variables
Sergei F. Chekmarev
Using the Helmholtz decomposition of the vector field of folding fluxes in a two-dimensional space of collective variables, a potential of the driving force for protein folding is…
Tendency to occupy a statistically dominant spatial state of the flow as a driving force for turbulent transition
Sergei F. Chekmarev
A simple analytical model for a turbulent flow is proposed, which considers the flow as a collection of localized spatial structures that are composed of elementary "cells" in whic…
Tendency to occupy a statistically dominant spatial state of the flow as a driving force for turbulent transition
Sergei F. Chekmarev
The transition from laminar to turbulent fluid motion occurring at large Reynolds numbers is generally associated with the instability of the laminar flow. On the other hand, since…