15 citations · 19 across the 7 of their papers we have counts for
7 papers
Interplay of energy, dissipation, and error in kinetic proofreading: Control via concentration and binding energy
Premashis Kumar, Kinshuk Banerjee, Gautam Gangopadhyay
Kinetic proofreading mechanisms explain the extraordinary accuracy observed in central biological events in terms of the enhanced specificity of substrate selection networks under…
How can we distinguish positive cooperativity from auto-catalysis in enzyme kinetics?
Sharmistha Dhatt, Kinshuk Banerjee, Kamal Bhattacharyya
Different graphical plots involving the catalytic rate with the (initial) substrate concentration exist in the enzyme kinetics literature to estimate the reaction constants. But, n…
Open chemical reaction networks, steady-state loads and Braess-like paradox
Kinshuk Banerjee, Kamal Bhattacharyya
Open chemical reaction systems involve matter-exchange with the surroundings. As a result, species can accumulate inside a system during the course of the reaction. We study the ro…
States with identical steady dissipation rate: Role of kinetic constants in enzyme catalysis
Kinshuk Banerjee, Kamal Bhattacharyya
A non-equilibrium steady state is characterized by a non-zero steady dissipation rate. Chemical reaction systems under suitable conditions may generate such states. We propose here…
Does an irreversible chemical cycle support equilibrium?
Kinshuk Banerjee, Kamal Bhattacharyya
The impossibility of attaining equilibrium for cyclic chemical reaction networks with irreversible steps is apparently due to a divergent entropy production rate. A deeper reason s…
How is entropy production rate related to chemical reaction rate?
Kinshuk Banerjee, Kamal Bhattacharyya
The entropy production rate is a key quantity in irreversible thermodynamics. In this work, we concentrate on the realization of entropy production rate in chemical reaction system…
Entropic estimate of cooperative binding of substrate on a single oligomeric enzyme: An index of cooperativity
Kinshuk Banerjee, Biswajit Das, Gautam Gangopadhyay
Here we have systematically studied the cooperative binding of substrate molecules on the active sites of a single oligomeric enzyme in a chemiostatic condition. The average number…