25 citations · 63 across the 9 of their papers we have counts for
9 papers
Modelling Biological and Ecological Systems with the Calculus of Wrapped Compartments
Marco Aldinucci, Livio Bioglio, Cristina Calcagno +8
The modelling and analysis of biological systems has deep roots in Mathematics, specifically in the field of Ordinary Differential Equations. Alternative approaches based on formal…
Pushing the boundaries of parallel Deep Learning -- A practical approach
Paolo Viviani, Maurizio Drocco, Marco Aldinucci
This work aims to assess the state of the art of data parallel deep neural network training, trying to identify potential research tracks to be exploited for performance improvemen…
A Formal Semantics for Data Analytics Pipelines
Maurizio Drocco, Claudia Misale, Guy Tremblay +1
In this report, we present a new programming model based on Pipelines and Operators, which are the building blocks of programs written in PiCo, a DSL for Data Analytics Pipelines.…
A parallel pattern for iterative stencil + reduce
M. Aldinucci, M. Danelutto, M. Drocco +4
We advocate the Loop-of-stencil-reduce pattern as a means of simplifying the implementation of data-parallel programs on heterogeneous multi-core platforms. Loop-of-stencil-reduce…
A Comparison of Big Data Frameworks on a Layered Dataflow Model
Claudia Misale, Maurizio Drocco, Marco Aldinucci +1
In the world of Big Data analytics, there is a series of tools aiming at simplifying programming applications to be executed on clusters. Although each tool claims to provide bette…
Modelling Spatial Interactions in the Arbuscular Mycorrhizal Symbiosis using the Calculus of Wrapped Compartments
Cristina Calcagno, Mario Coppo, Ferruccio Damiani +4
Arbuscular mycorrhiza (AM) is the most wide-spread plant-fungus symbiosis on earth. Investigating this kind of symbiosis is considered one of the most promising ways to develop met…
Hybrid Calculus of Wrapped Compartments
Mario Coppo, Ferruccio Damiani, Maurizio Drocco +4
The modelling and analysis of biological systems has deep roots in Mathematics, specifically in the field of ordinary differential equations (ODEs). Alternative approaches based on…
On Designing Multicore-aware Simulators for Biological Systems
Marco Aldinucci, Mario Coppo, Ferruccio Damiani +3
The stochastic simulation of biological systems is an increasingly popular technique in bioinformatics. It often is an enlightening technique, which may however result in being com…
Stochastic Calculus of Wrapped Compartments
Mario Coppo, Ferruccio Damiani, Maurizio Drocco +2
The Calculus of Wrapped Compartments (CWC) is a variant of the Calculus of Looping Sequences (CLS). While keeping the same expressiveness, CWC strongly simplifies the development o…