2 citations · 3 across the 3 of their papers we have counts for
3 papers · 1 filter
The expected neutral frequency spectrum of linked sites
Luca Ferretti, Alexander Klassmann, Emanuele Raineri +3
We present an exact, closed expression for the expected neutral Site Frequency Spectrum for two neutral sites, 2-SFS, without recombination. This spectrum is the immediate extensio…
Decomposing the site frequency spectrum: the impact of tree topology on neutrality tests
Luca Ferretti, Alice Ledda, Guillaume Achaz +2
We investigate the dependence of the site frequency spectrum (SFS) on the topological structure of genealogical trees. We show that basic population genetic statistics - for instan…
Watterson estimators for Next Generation Sequencing: from trios to autopolyploids
Luca Ferretti, Sebástian E. Ramos-Onsins
Several variations of the Watterson estimator of variability for Next Generation Sequencing (NGS) data have been proposed in the literature. We present a unified framework for gene…