117 citations · 118 across the 3 of their papers we have counts for
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q-bio.PE2026
Demographic inference of pathogen-infected populations from partially observed transmission forests
Matthew Hall
Genomic epidemiology has several methods for identifying which sampled individuals are linked by close proximity in the transmission chain, whether by grouping them into clusters u…
q-bio.PE2014★ 117 cited
Epidemic reconstruction in a phylogenetics framework: transmission trees as partitions
Matthew Hall, Andrew Rambaut
The reconstruction of transmission trees for epidemics from genetic data has been the subject of some recent interest. It has been demonstrated that the transmission tree structure…