92 citations · 594 across the 17 of their papers we have counts for
17 papers
Benchmarking inverse statistical approaches for protein structure and design with exactly solvable models
Hugo Jacquin, Amy Gilson, Eugene Shakhnovich +2
Inverse statistical approaches to determine protein structure and function from Multiple Sequence Alignments (MSA) are emerging as powerful tools in computational biology. However…
On the entropy of protein families
John Barton, Arup Chakraborty, Simona Cocco +2
Proteins are essential components of living systems, capable of performing a huge variety of tasks at the molecular level, such as recognition, signalling, copy, transport, ... The…
Resummed mean-field inference for strongly coupled data
Hugo Jacquin, A. Rancon
We present a resummed mean-field approximation for inferring the parameters of an Ising or a Potts model from empirical, noisy, one- and two-point correlation functions. Based on a…
Critical Casimir forces in a magnetic system: An experimental protocol
David Lopes Cardozo, Hugo Jacquin, Peter C. W. Holdsworth
We numerically test an experimentally realizable method for the extraction of the critical Casimir force based on its thermodynamic definition as the derivative of the excess free…
Generalized Langevin equations for a driven tracer in dense soft colloids: construction and applications
Vincent Démery, Hugo Jacquin, Olivier Bénichou
We describe a tracer in a bath of soft Brownian colloids by a particle coupled to the density field of the other bath particles. From the Dean equation, we derive an exact equation…
Glass and jamming transition of simple liquids: static and dynamic theory
Hugo Jacquin
We study the glass and jamming transition of finite-dimensional models of simple liquids: hard- spheres, harmonic spheres and more generally bounded pair potentials that modelize f…