activity
20102026
most citedDynamics of DNA breathing in the Peyrard-Bishop model with damping and external force

41 citations · 84 across the 12 of their papers we have counts for

collaborators

12 papers

gr-qc2026

A Quantum-Gravity-Motivated GUP Effective Metric

M. H. Al Ghifari, M. F. Fauzi, A. Rohim +3

Recent critiques have addressed certain aspects of the generalized uncertainty principle (GUP) effective metric (Ong 2023). This study presents a scale-dependent quadratic GUP effe…

gr-qc2025

Stable Cosmology from Minimal Theory of Mass-Varying Massive Gravity

Ahmad Khoirul Falah, Andy Octavian Latief, Husin Alatas +1

We study cosmological perturbations in the minimal theory of mass-varying massive gravity (MTMVMG), a constrained extension of mass-varying massive gravity that propagates only thr…

gr-qc2023

Some Cosmological Consequences of Higher Dimensional Klein-Gordon-Rastall Theory

Tegar Ari Widianto, Ahmad Khoirul Falah, Agus Suroso +2

Using dynamical system analysis, we investigate some cosmological consequences of Rastall gravity coupled to a scalar field (called the Klein-Gordon-Rastall theory) with exponentia…

gr-qc2021★ 1 cited

On the Photon Motion Near a Five-Dimensional Schwarzschild Black Hole

Husin Alatas, Siti A. Nuraeni, Ilma L. Saptiani +1

In this report, we discuss the dynamics of photons in a five-dimensional Schwarzschild black hole. We find that the corresponding Eddington-Finkelstein-like coordinate admits two t…

gr-qc2021

Higher-Dimensional Minimal Theory of Mass-Varying Massive Gravity And Its Cosmological Consequences

Ahmad Khoirul Falah, Andy Octavian Latief, Husin Alatas +1

In this paper we construct higher-dimensional minimal theory of mass-varying massive gravity (MTMVMG) where the masslike scalar potential is coupled to a vielbein potential, unlike…

gr-qc2019

On the Lapse Function of FLRW Accelerated Expanding Universe in dRGT Massive Gravity Theory

Husin Alatas, Ahmad K. Falah, Trio Wibowo +2

In this report, we discuss the behavior of coordinate-time dependent lapse function of FLRW metric of an accelerated expanding universe in the de Rham-Gabadadze-Tolley massive grav…

physics.optics2012

Symmetric two dimensional photonic crystal coupled waveguide with point defect for optical switch application

Hendradi Hardhienata, Husin Alatas

Two dimensional (2D) photonic crystals are well known for its ability to manipulate the propagation of electromagnetic wave inside the crystal. 1D and 2D photonic crystals are rela…

q-bio.BM2012★ 2 cited

Dynamics of DNA Bubble in Viscous Medium

A. Sulaiman, F. P. Zen, H. Alatas +1

The damping effect to the DNA bubble is investigated within the Peyrard-Bishop model. In the continuum limit, the dynamics of the bubble of DNA is described by the damped nonlinear…

physics.bio-ph2011★ 41 cited

Dynamics of DNA breathing in the Peyrard-Bishop model with damping and external force

A. Sulaiman, F. P. Zen, H. Alatas +1

The impact of damping effect and external forces to the DNA breathing is investigated within the Peyrard-Bishop model. In in the continuum limit, the dynamics of the breathing of D…

physics.bio-ph2011★ 19 cited

The thermal denaturation of Peyrard-Bishop model with an external potential

A. Sulaiman, F. P. Zen, H. Alatas +1

The impact of various types of external potentials to the Peyrard-Bishop DNA denaturation is investigated through statistical mechanics approach. The partition function is obtained…

cond-mat.stat-mech2011★ 3 cited

The thermodynamic properties of Davydov-Scott's protein model in thermal bath

A. Sulaiman, F. P Zen, H. Alatas +1

The thermodynamic properties of Davydov-Scott monomer contacting with thermal bath is investigated using Lindblad open quantum system formalism. The Lindblad equation is investigat…

cond-mat.stat-mech2010★ 18 cited

Anharmonic oscillation effect on the Davydov-Scott monomer in thermal bath

A. Sulaiman, F. P. Zen, H. Alatas +1

The dynamics of Davydov-Scott monomer in a thermal bath with higher order amide-site's displacement leads to anharmonic oscillation effect is investigated using full-quantum approa…