7 citations · 11 across the 4 of their papers we have counts for
9 papers
Computing the probability of gene trees concordant with the species tree in the multispecies coalescent
Jakub Truszkowski, Celine Scornavacca, Fabio Pardi
The multispecies coalescent process models the genealogical relationships of genes sampled from several species, enabling useful predictions about phenomena such as the discordance…
Cutting an alignment with Ockham's razor
Mark Jones, Philippe Gambette, Leo van Iersel +4
In this article, we investigate different parsimony-based approaches towards finding recombination breakpoints in a multiple sequence alignment. This recombination detection task i…
Generation of Tree-Child phylogenetic networks
Gabriel Cardona, Joan Carles Pons, Celine Scornavacca
Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have bee…
An time Algorithm for computing the Path-length Distance between Trees
David Bryant, Celine Scornavacca
Tree comparison metrics have proven to be an invaluable aide in the reconstruction and analysis of phylogenetic (evolutionary) trees. The path-length distance between trees is a pa…
Reconciling Multiple Genes Trees via Segmental Duplications and Losses
Riccardo Dondi, Manuel Lafond, Celine Scornavacca
Reconciling gene trees with a species tree is a fundamental problem to understand the evolution of gene families. Many existing approaches reconcile each gene tree independently. H…
Finding the most parsimonious or likely tree in a network with respect to an alignment
Steven Kelk, Fabio Pardi, Celine Scornavacca +1
Phylogenetic networks are often constructed by merging multiple conflicting phylogenetic signals into a directed acyclic graph. It is interesting to explore whether a network const…