23 citations · 40 across the 11 of their papers we have counts for
3 papers · 1 filter
From Gene Expression to Drug Response: A Collaborative Filtering Approach
Cheng Qian, Nicholas D. Sidiropoulos, Magda Amiridi +1
Predicting the response of cancer cells to drugs is an important problem in pharmacogenomics. Recent efforts in generation of large scale datasets profiling gene expression and dru…
MetaPar: Metagenomic Sequence Assembly via Iterative Reclassification
Minji Kim, Jonathan G. Ligo, Amin Emad +3
We introduce a parallel algorithmic architecture for metagenomic sequence assembly, termed MetaPar, which allows for significant reductions in assembly time and consequently enable…
Casual Compressive Sensing for Gene Network Inference
Mo Deng, Amin Emad, Olgica Milenkovic
We propose a novel framework for studying causal inference of gene interactions using a combination of compressive sensing and Granger causality techniques. The gist of the approac…