2 papers
cs.MS2016
TTC: A high-performance Compiler for Tensor Transpositions
Paul Springer, Jeff R. Hammond, Paolo Bientinesi
We present TTC, an open-source parallel compiler for multidimensional tensor transpositions. In order to generate high-performance C++ code, TTC explores a number of optimizations,…
cond-mat.stat-mech2011
Flow-dependent unfolding and refolding of an RNA by nonequilibrium umbrella sampling
Alex Dickson, Mark Maienschein-Cline, Allison Tovo-Dwyer +2
Nonequilibrium experiments of single biomolecules such as force-induced unfolding reveal details about a few degrees of freedom of a complex system. Molecular dynamics simulations…