activity
20112024
most citedBayesian Nonparametric Ordination for the Analysis of Microbial Communities

31 citations · 96 across the 11 of their papers we have counts for

collaborators

13 papers

physics.comp-ph2024★ 3 cited

Active Learning for Discovering Complex Phase Diagrams with Gaussian Processes

Max Zhu, Jian Yao, Marcus Mynatt +5

We introduce a Bayesian active learning algorithm that efficiently elucidates phase diagrams. Using a novel acquisition function that assesses both the impact and likelihood of the…

cs.LG2023

Tanimoto Random Features for Scalable Molecular Machine Learning

Austin Tripp, Sergio Bacallado, Sukriti Singh +1

The Tanimoto coefficient is commonly used to measure the similarity between molecules represented as discrete fingerprints, either as a distance metric or a positive definite kerne…

stat.ML2022★ 1 cited

Conditional Neural Processes for Molecules

Miguel Garcia-Ortegon, Andreas Bender, Sergio Bacallado

Neural processes (NPs) are models for transfer learning with properties reminiscent of Gaussian Processes (GPs). They are adept at modelling data consisting of few observations of…

stat.ML2021

DOCKSTRING: easy molecular docking yields better benchmarks for ligand design

Miguel García-Ortegón, Gregor N. C. Simm, Austin J. Tripp +3

The field of machine learning for drug discovery is witnessing an explosion of novel methods. These methods are often benchmarked on simple physicochemical properties such as solub…

math.PR2021

The *-Edge-Reinforced Random Walk

Sergio Bacallado, Christophe Sabot, Pierre Tarrès

We define a linearly reinforced process called the *-Edge-Reinforced Random Walk (*-ERRW ) which can be seen as a Yaglom reversible, hence non-reversible, extension of the Edge-Rei…

stat.AP2020

BETS: The dangers of selection bias in early analyses of the coronavirus disease (COVID-19) pandemic

Qingyuan Zhao, Nianqiao Ju, Sergio Bacallado +1

The coronavirus disease 2019 (COVID-19) has quickly grown from a regional outbreak in Wuhan, China to a global pandemic. Early estimates of the epidemic growth and incubation perio…