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cs.CL2025
BioClinical ModernBERT: A State-of-the-Art Long-Context Encoder for Biomedical and Clinical NLP
Thomas Sounack, Joshua Davis, Brigitte Durieux +7
Encoder-based transformer models are central to biomedical and clinical Natural Language Processing (NLP), as their bidirectional self-attention makes them well-suited for efficien…
cs.CL2025
MedSlice: Fine-Tuned Large Language Models for Secure Clinical Note Sectioning
Joshua Davis, Thomas Sounack, Kate Sciacca +4
Extracting sections from clinical notes is crucial for downstream analysis but is challenging due to variability in formatting and labor-intensive nature of manual sectioning. Whil…
cs.CL2024
CheXpert Plus: Augmenting a Large Chest X-ray Dataset with Text Radiology Reports, Patient Demographics and Additional Image Formats
Pierre Chambon, Jean-Benoit Delbrouck, Thomas Sounack +6
Since the release of the original CheXpert paper five years ago, CheXpert has become one of the most widely used and cited clinical AI datasets. The emergence of vision language mo…