358 citations · 368 across the 3 of their papers we have counts for
3 papers
DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies
Chengxi Ye, Chris Hill, Shigang Wu +3
(An updated version of this manuscript has been accepted to Scientific Reports in 2016, please refer to http://www.nature.com/articles/srep31900) The highly anticipated transition…
SparseAssembler2: Sparse k-mer Graph for Memory Efficient Genome Assembly
Chengxi Ye, Charles H. Cannon, Zhanshan Sam Ma +2
The formal version of our work has been published in BMC Bioinformatics and can be found here: http://www.biomedcentral.com/1471-2105/13/S6/S1 Motivation: To tackle the problem of…
SparseAssembler: de novo Assembly with the Sparse de Bruijn Graph
Chengxi Ye, Zhanshan Sam Ma, Charles H. Cannon +2
de Bruijn graph-based algorithms are one of the two most widely used approaches for de novo genome assembly. A major limitation of this approach is the large computational memory s…