activity
20092023
most citedTopological data analysis of zebrafish patterns

96 citations · 244 across the 21 of their papers we have counts for

collaborators

25 papers

q-bio.QM2023★ 22 cited

Parameter identifiability in PDE models of fluorescence recovery after photobleaching

Maria-Veronica Ciocanel, Lee Ding, Lucas Mastromatteo +4

Identifying unique parameters for mathematical models describing biological data can be challenging and often impossible. Parameter identifiability for partial differential equatio…

math.DS2023

Truncation of contact defects in reaction-diffusion systems

Milen Ivanov, Bjorn Sandstede

Contact defects are time-periodic patterns in one space dimension that resemble spatially homogeneous oscillations with an embedded defect in their core region. For theoretical and…

q-bio.CB2022

Quantifying different modeling frameworks using topological data analysis: a case study with zebrafish patterns

Electa Cleveland, Angela Zhu, Bjorn Sandstede +1

Mathematical models come in many forms across biological applications. In the case of complex, spatial dynamics and pattern formation, stochastic models also face two main challeng…

q-bio.QM2022

Topological Data Analysis of Spatial Patterning in Heterogeneous Cell Populations: Clustering and Sorting with Varying Cell-Cell Adhesion

Dhananjay Bhaskar, William Y. Zhang, Alexandria Volkening +2

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength…

cs.CY2022★ 4 cited

The Drift of #MyBodyMyChoice Discourse on Twitter

Cristina Menghini, Justin Uhr, Shahrzad Haddadan +3

#MyBodyMyChoice is a well-known hashtag originally created to advocate for women's rights, often used in discourse about abortion and bodily autonomy. The Covid-19 outbreak prompte…

math.DS2022★ 13 cited

Localized patterns in planar bistable weakly coupled lattice systems

Jason J. Bramburger, Bjorn Sandstede

Localized planar patterns in spatially extended bistable systems are known to exist along intricate bifurcation diagrams, which are commonly referred to as snaking curves. Their an…