3 papers
q-bio.QM2026
ToFiE, a Topology-aware Fiber Extraction workflow for 3D reconstruction of dense and heterogeneous biological fiber networks from microscopy images
Risa Togo, Sara Cardona, Irène Nagle +3
Fibrous networks are ubiquitous structural components in biology, spanning cellulose in plant cell walls, fibrin in blood clots, and collagen in the extracellular matrix of animal…
physics.med-ph2025
A Multiscale Framework for In Silico Thrombus Generation and Photoacoustic Simulations
Hamed Ghodsi, Sara Cardona, Behrooz Fereidoonnezhad +1
Thrombus microstructure plays a critical role in determining the treatment success for thrombus-related diseases such as stroke and deep vein thrombosis. However, no in vivo diagno…
cond-mat.soft2025
TopoGEN: topology-driven microstructure generation for in silico modeling of fiber network mechanics
Sara Cardona, Mathias Peirlinck, Behrooz Fereidoonnezhad
The fields of mechanobiology and biomechanics are expanding our understanding of the complex behavior of soft biological tissues across multiple scales. Given the intricate connect…