7 citations · 8 across the 2 of their papers we have counts for
2 papers
q-bio.GN2023★ 1 cited
De novo reconstruction of satellite repeat units from sequence data
Yujie Zhang, Justin Chu, Haoyu Cheng +1
Satellite DNA are long tandemly repeating sequences in a genome and may be organized as high-order repeats (HORs). They are enriched in centromeres and are challenging to assemble.…
q-bio.GN2021★ 7 cited
GapPredict: A Language Model for Resolving Gaps in Draft Genome Assemblies
Eric Chen, Justin Chu, Jessica Zhang +2
Short-read DNA sequencing instruments can yield over 1e+12 bases per run, typically composed of reads 150 bases long. Despite this high throughput, de novo assembly algorithms have…