14 citations · 48 across the 9 of their papers we have counts for
9 papers
Stable developmental patterns of gene expression without morphogen gradients
Maciej Majka, Nils B. Becker, Pieter Rein ten Wolde +2
Gene expression patterns (GEPs) are established by cross-regulating target genes that interpret morphogen gradients. However, as development progresses, morphogen activity is reduc…
Stability of pattern formation in systems with dynamic source regions
M. Majka, R. D. J. G. Ho, M. Zagorski
We explain the principles of gene expression pattern stabilization in systems of interacting, diffusible morphogens, with dynamically established source regions. Using a reaction-d…
Effective one-component model of binary mixture: molecular arrest induced by the spatially correlated stochastic dynamics
M. Majka, P. F. Góra
Spatially correlated noise (SCN), i.e. the thermal noise that affects neighbouring particles in a similar manner, is ubiquitous in soft matter systems. In this work, we apply the o…
The effects of subdiffusion on the NTA size measurements of extracellular vesicles in biological samples
M. Majka, M. Durak-Kozica, A. Kamińska +3
The interest in the extracellular vesicles (EVs) is rapidly growing as they became reliable biomarkers for many diseases. For this reason, fast and accurate techniques of EVs size…
Collectivity in diffusion of colloidal particles: from effective interactions to spatially correlated noise
M. Majka, P. F. Góra
The collectivity in the simultaneous diffusion of many particles, i.e. the interdependence of stochastic forces affecting different particles in the same solution, is a largely ove…
Thermodynamically consistent Langevin dynamics with spatially correlated noise predicts frictionless regime and transient attraction effect
M. Majka, P. F. Góra
While the origin of temporal correlations in Langevin dynamics have been thoroughly researched, the understanding of Spatially Correlated Noise (SCN) is rather incomplete. In parti…
Non-Gaussian polymers described by alpha-stable chain statistics: model, applications and effective interactions in binary mixtures
M. Majka, P. F. Góra
The Gaussian chain model is the classical description of a polymeric chain, which provides the analytical results regarding end-to-end distance, the distribution of segments around…
A model for effective interactions in binary colloidal systems of soft particles
M. Majka, P. F. Góra
While the density functional theory with integral equations techniques are very efficient tools in numerical analysis of complex fluids, an analytical insight into the phenomenon o…
Polymer unfolding and motion synchronization induced by spatially correlated noise
M. Majka, P. F. Góra
The problem of a spatially correlated noise affecting a complex system is studied in this paper. We present a comprehensive analysis of a 2D model polymer chain, driven by the spat…