3 papers
cs.IR2026
Neighborhood-Aware Dual Biomedical Entity Linking
Yicheng Tao, Jie Liu
Biomedical entity linking grounds mentions in clinical and scientific text to entities in a curated knowledge base (KB) with ontological structure, which supports downstream applic…
cs.CL2026
AutoPCR: Automated Phenotype Concept Recognition by Prompting
Yicheng Tao, Yuanhao Huang, Yiqun Wang +2
Motivation: Phenotype concept recognition (CR) is a fundamental task in biomedical text mining. However, existing methods either require ontology-specific training, making them str…
cs.CL2025
Biomedical Question Answering via Multi-Level Summarization on a Local Knowledge Graph
Lingxiao Guan, Yuanhao Huang, Jie Liu
In Question Answering (QA), Retrieval Augmented Generation (RAG) has revolutionized performance in various domains. However, how to effectively capture multi-document relationships…