2 papers
q-bio.TO2023
A parallelized cellular Potts model that enables simulations at tissue scale
Shabaz Sultan, Sapna Devi, Scott N. Mueller +1
The Cellular Potts Model (CPM) is a widely used simulation paradigm for systems of interacting cells that has been used to study scenarios ranging from plant development to morphog…
nlin.CG2023
Fitting Stochastic Lattice Models Using Approximate Gradients
Jan Schering, Sander Keemink, Johannes Textor
Stochastic lattice models (sLMs) are computational tools for simulating spatiotemporal dynamics in physics, computational biology, chemistry, ecology, and other fields. Despite the…